diff --git a/erpnext/accounts/doctype/payment_request/payment_request.py b/erpnext/accounts/doctype/payment_request/payment_request.py
index e0a88f30ce2..4e12deb5097 100644
--- a/erpnext/accounts/doctype/payment_request/payment_request.py
+++ b/erpnext/accounts/doctype/payment_request/payment_request.py
@@ -379,6 +379,7 @@ class PaymentRequest(Document):
 			bank_amount=bank_amount,
 			created_from_payment_request=True,
 		)
+		payment_entry.set_missing_ref_details(force=True)
 
 		payment_entry.update(
 			{
diff --git a/erpnext/accounts/doctype/payment_request/test_payment_request.py b/erpnext/accounts/doctype/payment_request/test_payment_request.py
index c2eef5412e5..47b8043c78c 100644
--- a/erpnext/accounts/doctype/payment_request/test_payment_request.py
+++ b/erpnext/accounts/doctype/payment_request/test_payment_request.py
@@ -775,6 +775,22 @@ class TestPaymentRequest(ERPNextTestSuite):
 		pi.load_from_db()
 		self.assertEqual(pr_2.grand_total, pi.outstanding_amount)
 
+	def test_payment_entry_reference_details_fetched_from_invoice(self):
+		pi = make_purchase_invoice(currency="INR", qty=1, rate=94500)
+		pi.submit()
+
+		pr = make_payment_request(dt="Purchase Invoice", dn=pi.name, mute_email=1, submit_doc=0, return_doc=1)
+		pr.grand_total = 94000
+		pr.submit()
+
+		pe = pr.create_payment_entry(submit=False)
+
+		self.assertEqual(pe.references[0].reference_name, pi.name)
+		self.assertEqual(pe.references[0].total_amount, pi.grand_total)
+		self.assertEqual(pe.references[0].outstanding_amount, pi.outstanding_amount)
+		self.assertEqual(pe.references[0].allocated_amount, 94000)
+		self.assertEqual(pe.paid_amount, 94000)
+
 	def test_consider_journal_entry_and_return_invoice(self):
 		from erpnext.accounts.doctype.journal_entry.test_journal_entry import make_journal_entry